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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793273.1_cds_XP_016433118.1_2854
CDS Infomation

[gene=LOC107759644] [db_xref=GeneID:107759644] [protein=patatin-like protein 2] [protein_id=XP_016433118.1] [location=complement(join(109722..109997,110683..110985,111080..111241,111514..111697,111798..111979,112357..112533))] [gbkey=CDS]
Sequence

ATGGGTAGAACTTTTGTAGCTGCACTAACTTTATTAGTGACTCTTCATGTTCTACTACCT
GTTATGGTTTCTGCTGCTACAAAAGGAAAGATAGTAACAGTTTTGAGCATAGATGGAGGT
GGCATCAGAGGCATTATTCCTGGCACCCTTCTTGCTTTCCTTGAATCCAAGCTTCAGGAC
ATAGATGGACCGAATGCAAGAATTGCAGACTATTTTGATGTTGTAGCTGGAACGAGCACA
GGTGGACTAATAAGCACCATGCTCACAGCTCCAAACAAGGATAATCGCCCTTTATATGCA
GCGAAAAATATTACCAATTTCTATATGGAGCACGGCTCTAAAATCTTTCCTGAGAGCAGC
CGCAGCGGGTTTGTCAAGAGAATCACAAATTTATTTGGGGGCCCAAAGTATGACGGAAAA
TATCTAAAAACATTGGTTAAGTCAATATTAGGCAATCTTACTATGAAGCAAACATTGACT
CAAACAGTCATCCCAGCTTTTGATATCAAGCGCCTTCAACCTATCGTCTTCACAACTGCT
GATGCCAAAACTCACGTCTCTAGGGATGCTCTACTATCTGACATCTGCCTTAGTACCTCT
GCAGCACCCACCTATTTCCCTGTACATTATTTTGAGACCAAGGATGCTCAAGGGAAAACA
CGTACATTTGATCTCATTGATGGAGGTGTAGCTGCAAATAATCCAACTCTAGTGGCAATT
AGTCACATTTCGAAAGAAATCATGTTAGGGAAATCCCAATACGAGGGCATGGAACCAATG
GACTGTAAGAAAATGATGGTTCTGTCATTGGGGACTGGTATAGGCAAGGAGGAAAAGAAG
TATAGCGCAGCCGTGGCTTCCTCGTGGGGTGTACTTGGTTGGTTGTACAACAATGGTGCA
AGTCCATTGCTAGACGTTTTTGGTGATGCAAGTGCTGATATTGTGGATATACACCTTTCC
ACCATGTTTCAGTCCCTTCAAAACGAAAAGAACTATCTTCGAATTCAGGATGATAGTTTG
ACCGGGGAGGCTGCATCTATGGATATTTCAACCACAAAGAACATGAAAACACTTGTGCAA
ATTGGTAATGATCTATTAAAGAAGCCTGTGTCAAGAGTTAACTTAGACACCGGTCGCTAT
GAACAAGTTTCTGGTGAGGGGACCAATGAAGAAGCTCTTATTCGCTTTGCTAAGTTGCTT
TCAGAGCAAATAAAACTTCGACAGCCAGTGGAGGAGTTCACCTCCACTAGGAAAATACTC
CAAGAATCTGTCAAACACCAATAA

Peptide Sequence

PEP ID

XP_016433118.1
PEP Infomation

PREDICTED: patatin-like protein 2 [Nicotiana tabacum]
Sequence

MGRTFVAALTLLVTLHVLLPVMVSAATKGKIVTVLSIDGGGIRGIIPGTLLAFLESKLQD
IDGPNARIADYFDVVAGTSTGGLISTMLTAPNKDNRPLYAAKNITNFYMEHGSKIFPESS
RSGFVKRITNLFGGPKYDGKYLKTLVKSILGNLTMKQTLTQTVIPAFDIKRLQPIVFTTA
DAKTHVSRDALLSDICLSTSAAPTYFPVHYFETKDAQGKTRTFDLIDGGVAANNPTLVAI
SHISKEIMLGKSQYEGMEPMDCKKMMVLSLGTGIGKEEKKYSAAVASSWGVLGWLYNNGA
SPLLDVFGDASADIVDIHLSTMFQSLQNEKNYLRIQDDSLTGEAASMDISTTKNMKTLVQ
IGNDLLKKPVSRVNLDTGRYEQVSGEGTNEEALIRFAKLLSEQIKLRQPVEEFTSTRKIL
QESVKHQ

Transcript Sequence

Gene sequence data has not been registered.